knowledge-search

git clone git://archive.git.mtrnord.blog/MTRNord/knowledge-search.git
Log | Files | Refs | README | LICENSE

commit b37671f5d1673a072810df40ced96753f6de447d
Author: MTRNord <mtrnord1@gmail.com>
Date:   Thu, 23 Mar 2023 16:08:56 +0100

chore: Initial Commit

Diffstat:
A.gitignore | 4++++
A.pre-commit-config.yaml | 18++++++++++++++++++
ACargo.lock | 3453+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
ACargo.toml | 2++
AREADME.md | 15+++++++++++++++
Acliff.toml | 71+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Acrates/knowledge-search/Cargo.toml | 12++++++++++++
Acrates/knowledge-search/src/algos.rs | 91+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Acrates/knowledge-search/src/main.rs | 4++++
Acrates/matrix-indexer/Cargo.toml | 22++++++++++++++++++++++
Acrates/matrix-indexer/src/indradb_utils.rs | 196+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Acrates/matrix-indexer/src/main.rs | 27+++++++++++++++++++++++++++
Acrates/matrix-indexer/src/matrix.rs | 250+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Acrates/utils/Cargo.toml | 12++++++++++++
Acrates/utils/src/lib.rs | 35+++++++++++++++++++++++++++++++++++
15 files changed, 4212 insertions(+), 0 deletions(-)

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It is mainly for personal use +so fixes will be slow or never happen. Features PRs are appreciated but I will +focus on implementing things that I care about. + +## Commit Guideline + +Please use [conventional commits](https://www.conventionalcommits.org). You can use the pre-commit script to ensure you +do use conventional commits by running `pre-commit install --hook-type commit-msg` +after [installing pre-commit](https://pre-commit.com/#install). diff --git a/cliff.toml b/cliff.toml @@ -0,0 +1,71 @@ +# configuration file for git-cliff +# see https://github.com/orhun/git-cliff#configuration-file + +[changelog] +# changelog header +header = """ +# Changelog\n +All notable changes to this project will be documented in this file.\n +""" +# template for the changelog body +# https://tera.netlify.app/docs/#introduction +body = """ +{% if version %}\ + ## [{{ version | trim_start_matches(pat="v") }}] - {{ timestamp | date(format="%Y-%m-%d") }} +{% else %}\ + ## [unreleased] +{% endif %}\ +{% for group, commits in commits | group_by(attribute="group") %} + ### {{ group | upper_first }} + {% for commit in commits %} + - {% if commit.breaking %}[**breaking**] {% endif %}{{ commit.message | upper_first }}\ + {% endfor %} +{% endfor %}\n +""" +# remove the leading and trailing whitespace from the template +trim = true +# changelog footer +footer = """ +<!-- generated by git-cliff --> +""" + +[git] +# parse the commits based on https://www.conventionalcommits.org +conventional_commits = true +# filter out the commits that are not conventional +filter_unconventional = true +# process each line of a commit as an individual commit +split_commits = false +# regex for preprocessing the commit messages +commit_preprocessors = [ + # { pattern = '\((\w+\s)?#([0-9]+)\)', replace = "([#${2}](https://github.com/orhun/git-cliff/issues/${2}))"}, # replace issue numbers +] +# regex for parsing and grouping commits +commit_parsers = [ + { message = "^feat", group = "Features"}, + { message = "^fix", group = "Bug Fixes"}, + { message = "^doc", group = "Documentation"}, + { message = "^perf", group = "Performance"}, + { message = "^refactor", group = "Refactor"}, + { message = "^style", group = "Styling"}, + { message = "^test", group = "Testing"}, + { message = "^chore\\(release\\): prepare for", skip = true}, + { message = "^chore", group = "Miscellaneous Tasks"}, + { body = ".*security", group = "Security"}, +] +# protect breaking changes from being skipped due to matching a skipping commit_parser +protect_breaking_commits = false +# filter out the commits that are not matched by commit parsers +filter_commits = false +# glob pattern for matching git tags +tag_pattern = "v[0-9]*" +# regex for skipping tags +skip_tags = "v0.1.0-beta.1" +# regex for ignoring tags +ignore_tags = "" +# sort the tags topologically +topo_order = false +# sort the commits inside sections by oldest/newest order +sort_commits = "oldest" +# limit the number of commits included in the changelog. +# limit_commits = 42 diff --git a/crates/knowledge-search/Cargo.toml b/crates/knowledge-search/Cargo.toml @@ -0,0 +1,11 @@ +[package] +name = "knowledge-search" +version = "0.0.0" +edition = "2021" + +# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html + +[dependencies] +clap = { version = "4.1.11", features = ["derive"] } +tokio = { version = "1.26.0", features = ["full"] } +utils = { version = "0.0.0", path = "../utils" } +\ No newline at end of file diff --git a/crates/knowledge-search/src/algos.rs b/crates/knowledge-search/src/algos.rs @@ -0,0 +1,91 @@ +use std::collections::{HashMap, HashSet}; + +#[derive(Debug)] +struct PageRank { + graph: HashMap<String, HashSet<String>>, + ranks: HashMap<String, f32>, + damping_factor: f32, + epsilon: f32, +} + +impl PageRank { + fn new(graph: HashMap<String, HashSet<String>>) -> Self { + let node_count = graph.len() as f32; + let damping_factor = 0.85; + let epsilon = 0.0001; + + let rank = 1.0 / node_count; + + let ranks = HashMap::from_iter(graph.keys().map(|k| (k.to_owned(), rank))); + + PageRank { + graph, + ranks, + damping_factor, + epsilon, + } + } + + fn compute(&mut self) { + let mut error = f32::INFINITY; + let mut new_ranks = HashMap::new(); + + while error > self.epsilon { + new_ranks.clear(); + + let dangling_nodes_sum = self.compute_dangling_nodes_sum(); + + for (node_id, neighbors) in self.graph.iter() { + let mut rank = (1.0 - self.damping_factor) / self.graph.len() as f32; + + for neighbor_id in neighbors.iter() { + let neighbor_rank = self.ranks.get(neighbor_id).unwrap_or(&0.0); + let neighbor_outdegree = + self.graph.get(neighbor_id).map_or(0.0, |n| n.len() as f32); + rank += self.damping_factor * neighbor_rank / neighbor_outdegree; + } + + rank += self.damping_factor * dangling_nodes_sum / self.graph.len() as f32; + new_ranks.insert(node_id.clone(), rank); + } + + let mut max_error = 0.0; + for (node_id, rank) in new_ranks.iter() { + let old_rank = self.ranks.get(node_id).unwrap_or(&0.0); + let error = (rank - old_rank).abs(); + + if error > max_error { + max_error = error; + } + } + + error = max_error; + self.ranks = new_ranks.clone(); + } + } + + fn compute_dangling_nodes_sum(&self) -> f32 { + let mut sum = 0.0; + + for (node_id, neighbors) in self.graph.iter() { + if neighbors.is_empty() { + sum += self.ranks.get(node_id).unwrap_or(&0.0); + } + } + + sum + } + + fn top_n(&self, n: usize) -> Vec<String> { + let mut rank_vec: Vec<(String, f32)> = + self.ranks.iter().map(|(k, v)| (k.clone(), *v)).collect(); + + rank_vec.sort_by(|a, b| b.1.partial_cmp(&a.1).unwrap()); + + rank_vec + .iter() + .take(n) + .map(|(node_id, _)| node_id.clone()) + .collect() + } +} diff --git a/crates/knowledge-search/src/main.rs b/crates/knowledge-search/src/main.rs @@ -0,0 +1,4 @@ +mod algos; +fn main() { + println!("Hello, world!"); +} diff --git a/crates/matrix-indexer/Cargo.toml b/crates/matrix-indexer/Cargo.toml @@ -0,0 +1,22 @@ +[package] +name = "matrix-indexer" +version = "0.0.0" +edition = "2021" + +# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html + +[dependencies] +async-channel = "1.8.0" +cfg-if = "1.0.0" +clap = { version = "4.1.11", features = ["derive"] } +color-eyre = "0.6.2" +futures = "0.3.27" +lazy_static = "1.4.0" +matrix-sdk = { version = "0.6.2", features = ["experimental-timeline", "eyre", "rustls-tls", "sled"], default-features = false } +serde = { version = "1.0.158", features = ["derive"] } +serde_json = "1.0.94" +tokio = { version = "1.26.0", features = ["full"] } +tracing = "0.1.37" +tracing-subscriber = "0.3.16" +utils = { version = "0.0.0", path = "../utils" } +uuid = { version = "1.3.0", features = [ "serde", "v4"] } diff --git a/crates/matrix-indexer/src/indradb_utils.rs b/crates/matrix-indexer/src/indradb_utils.rs @@ -0,0 +1,196 @@ +use std::{ + collections::{HashMap, VecDeque}, + mem::replace, +}; + +use color_eyre::Result; +use lazy_static::lazy_static; +use matrix_sdk::ruma::{OwnedEventId, OwnedRoomId}; +use tokio::task::JoinHandle; +use utils::{ + indradb::{self, BulkInsertItem}, + indradb_proto as proto, +}; +use uuid::{Context, Uuid}; + +const REQUEST_BUFFER_SIZE: usize = 10_000; + +lazy_static! { + static ref CONTEXT: Context = Context::new(0); +} + +pub struct BulkInserter { + requests: async_channel::Sender<Vec<indradb::BulkInsertItem>>, + workers: Vec<JoinHandle<()>>, + buf: Vec<indradb::BulkInsertItem>, + client: proto::Client, +} + +impl BulkInserter { + pub fn new(client: proto::Client) -> Self { + let (tx, rx) = async_channel::bounded::<Vec<indradb::BulkInsertItem>>(10); + let mut workers = Vec::default(); + + for _ in 0..10 { + let rx = rx.clone(); + let mut client = client.clone(); + workers.push(tokio::spawn(async move { + while let Ok(buf) = rx.recv().await { + client.bulk_insert(buf).await.unwrap(); + } + })); + } + + Self { + client, + requests: tx, + workers, + buf: Vec::with_capacity(REQUEST_BUFFER_SIZE), + } + } + + pub async fn sync(&mut self) -> Result<()> { + self.client.sync().await?; + Ok(()) + } + + pub async fn flush(mut self) { + if !self.buf.is_empty() { + self.requests.send(self.buf).await.unwrap(); + } + self.requests.close(); + for worker in self.workers.into_iter() { + worker.await.unwrap(); + } + self.client.sync().await.unwrap(); + } + + pub async fn push(&mut self, item: indradb::BulkInsertItem) { + self.buf.push(item); + if self.buf.len() >= REQUEST_BUFFER_SIZE { + let buf = replace(&mut self.buf, Vec::with_capacity(REQUEST_BUFFER_SIZE)); + self.requests.send(buf).await.unwrap(); + } + } +} + +#[derive(Clone)] +pub struct UUIDEventMapType { + pub event_id: OwnedEventId, + pub uuid: EventUuid, + pub event_type: utils::indradb::Identifier, + pub event_properties: EventProperties, +} + +#[derive(Clone)] +pub struct UUIDRoomMapType { + pub room_id: OwnedRoomId, + pub uuid: RoomUuid, + pub room_properties: RoomProperties, +} + +#[derive(Clone)] +pub enum EventProperties { + TextMessage(String, Option<String>, Option<String>), +} + +#[derive(Clone)] +pub struct RoomProperties { + pub name: Option<String>, + pub topic: Option<String>, +} + +pub type RoomUuid = Uuid; +pub type EventUuid = Uuid; + +// TODO: Track all the properties! +#[derive(Default)] +pub struct MessagesMap { + event_uuids: HashMap<OwnedEventId, EventUuid>, + pub message_list: VecDeque<UUIDEventMapType>, + room_uuids: HashMap<OwnedRoomId, RoomUuid>, + pub room_list: VecDeque<UUIDRoomMapType>, + pub room_event_links: HashMap<EventUuid, RoomUuid>, +} + +impl EventProperties { + pub fn as_vec(&self, uuid: Uuid) -> Result<Vec<BulkInsertItem>> { + match self { + EventProperties::TextMessage(body, format, formatted_body) => { + let mut vector = Vec::with_capacity(3); + vector.push(utils::indradb::BulkInsertItem::VertexProperty( + uuid, + utils::indradb::Identifier::new("text_message_body")?, + serde_json::Value::String(body.to_string()).into(), + )); + if let Some(format) = format { + vector.push(utils::indradb::BulkInsertItem::VertexProperty( + uuid, + utils::indradb::Identifier::new("text_message_format")?, + serde_json::Value::String(format.to_string()).into(), + )); + } + if let Some(formatted_body) = formatted_body { + vector.push(utils::indradb::BulkInsertItem::VertexProperty( + uuid, + utils::indradb::Identifier::new("text_message_formatted_body")?, + serde_json::Value::String(formatted_body.to_string()).into(), + )); + } + + Ok(vector) + } + } + } +} + +impl MessagesMap { + pub fn insert_event( + &mut self, + event_id: OwnedEventId, + room_uuid: RoomUuid, + event_type: utils::indradb::Identifier, + event_properties: EventProperties, + ) -> EventUuid { + // FIXME: We need to actually look them up here to get the uuid since we index live. + // This means the uuid list might not have all events when we are indexing reactions. + if let Some(&uuid) = self.event_uuids.get(&event_id) { + return uuid; + } + + let uuid = Uuid::new_v4(); + let map_thingy = UUIDEventMapType { + event_id: event_id.clone(), + uuid, + event_type, + event_properties, + }; + self.event_uuids.insert(event_id, uuid); + self.message_list.push_back(map_thingy); + self.room_event_links.insert(uuid, room_uuid); + uuid + } + + pub fn insert_room( + &mut self, + room_id: OwnedRoomId, + room_properties: RoomProperties, + ) -> RoomUuid { + // FIXME: We need to actually look them up here to get the uuid since we index live. + // This means the uuid list might not have all events when we are indexing reactions. + // FIXME: we probably need to also make updates for roomnames and topic here + if let Some(&uuid) = self.room_uuids.get(&room_id) { + return uuid; + } + + let uuid = Uuid::new_v4(); + let map_thingy = UUIDRoomMapType { + room_id: room_id.clone(), + uuid, + room_properties, + }; + self.room_uuids.insert(room_id, uuid); + self.room_list.push_back(map_thingy); + uuid + } +} diff --git a/crates/matrix-indexer/src/main.rs b/crates/matrix-indexer/src/main.rs @@ -0,0 +1,27 @@ +use color_eyre::Result; + +use clap::Parser; +use matrix::IndexerBot; +use tracing::info; + +mod indradb_utils; +mod matrix; + +/// An indexer for the knowledge search that indexes matrix +#[derive(Parser, Debug)] +#[command(author, version, about, long_about = None)] +struct Args {} + +#[tokio::main] +async fn main() -> Result<()> { + color_eyre::install()?; + tracing_subscriber::fmt::init(); + let _args = Args::parse(); + + // TODO: config which rewrites itself to have the data after login + let mut bot = + IndexerBot::new(String::new(), String::new(), String::new()).await?; + bot.start_processing().await; + + Ok(()) +} diff --git a/crates/matrix-indexer/src/matrix.rs b/crates/matrix-indexer/src/matrix.rs @@ -0,0 +1,250 @@ +use std::path::Path; + +use crate::indradb_utils::{BulkInserter, MessagesMap, UUIDEventMapType, UUIDRoomMapType}; +use color_eyre::Result; +use futures::StreamExt; +use matrix_sdk::{ + config::SyncSettings, + ruma::{ + events::{ + room::message::MessageType, AnySyncMessageLikeEvent, AnySyncTimelineEvent, + SyncMessageLikeEvent, + }, + OwnedUserId, + }, + Client, Session, +}; +use tracing::{error, info}; + +pub struct IndexerBot { + client: Client, + indexer_client: utils::indradb_proto::Client, + message_map: MessagesMap, + room_type: utils::indradb::Identifier, + room_id_type: utils::indradb::Identifier, + room_name_type: utils::indradb::Identifier, + room_topic_type: utils::indradb::Identifier, + text_message_event_type: utils::indradb::Identifier, + notice_message_event_type: utils::indradb::Identifier, + event_id_type: utils::indradb::Identifier, +} + +impl IndexerBot { + async fn get_client(homeserver_url: String) -> Result<Client> { + let mut client_builder = Client::builder().homeserver_url(homeserver_url); + client_builder = client_builder.sled_store(Path::new("./matrix_data"), None)?; + + Ok(client_builder.build().await?) + } + + pub async fn new(homeserver_url: String, user_id: String, password: String) -> Result<Self> { + let client = IndexerBot::get_client(homeserver_url).await?; + client + .login_username(&user_id, &password) + .initial_device_display_name("Knowledge Indexer bot") + .send() + .await?; + + info!("Trying to connect to indradb"); + let mut indexer_client = utils::get_client_retrying().await?; + indexer_client.ping().await?; + info!("Connected to indradb"); + + Ok(IndexerBot { + client, + indexer_client, + message_map: MessagesMap::default(), + room_type: utils::indradb::Identifier::new("matrix_room")?, + room_id_type: utils::indradb::Identifier::new("room_id")?, + room_name_type: utils::indradb::Identifier::new("room_name")?, + room_topic_type: utils::indradb::Identifier::new("room_topic")?, + text_message_event_type: utils::indradb::Identifier::new("text_message_event")?, + notice_message_event_type: utils::indradb::Identifier::new("notice_message_event")?, + event_id_type: utils::indradb::Identifier::new("event_id")?, + }) + } + + pub async fn relogin( + homeserver_url: String, + user_id: String, + access_token: String, + device_id: String, + ) -> Result<Self> { + let client = IndexerBot::get_client(homeserver_url).await?; + client + .restore_login(Session { + access_token, + device_id: device_id.into(), + refresh_token: None, + user_id: OwnedUserId::try_from(user_id)?, + }) + .await?; + + info!("Trying to connect to indradb"); + let mut indexer_client = utils::get_client_retrying().await?; + indexer_client.ping().await?; + info!("Connected to indradb"); + + let client_clone = client.clone(); + tokio::spawn(async move { + let settings = SyncSettings::default(); + client_clone.sync(settings).await.unwrap(); + }); + + Ok(IndexerBot { + client, + indexer_client, + message_map: MessagesMap::default(), + room_type: utils::indradb::Identifier::new("matrix_room")?, + room_id_type: utils::indradb::Identifier::new("room_id")?, + room_name_type: utils::indradb::Identifier::new("room_name")?, + room_topic_type: utils::indradb::Identifier::new("room_topic")?, + text_message_event_type: utils::indradb::Identifier::new("text_message_event")?, + notice_message_event_type: utils::indradb::Identifier::new("notice_message_event")?, + event_id_type: utils::indradb::Identifier::new("event_id")?, + }) + } + + pub async fn start_processing(&mut self) { + let mut inserter = BulkInserter::new(self.indexer_client.clone()); + + let mut sync_stream = Box::pin(self.client.sync_stream(SyncSettings::default()).await); + + while let Some(Ok(response)) = sync_stream.next().await { + for (ref room_id, room) in response.rooms.join { + for e in &room.timeline.events { + let room_uuid = if let Some(room) = self.client.get_joined_room(room_id) { + self.message_map.insert_room( + room_id.clone(), + crate::indradb_utils::RoomProperties { + name: room.name(), + topic: room.topic(), + }, + ) + } else { + self.message_map.insert_room( + room_id.clone(), + crate::indradb_utils::RoomProperties { + name: None, + topic: None, + }, + ) + }; + + match e.event.deserialize() { + Ok(AnySyncTimelineEvent::MessageLike( + AnySyncMessageLikeEvent::RoomMessage(event), + )) => { + if let SyncMessageLikeEvent::Original(message) = event { + match message.content.msgtype { + MessageType::Text(message_content) => { + self.message_map.insert_event( + message.event_id, + room_uuid, + self.text_message_event_type, + crate::indradb_utils::EventProperties::TextMessage( + message_content.body, + message_content + .formatted + .clone() + .map(|x| x.format.to_string()), + message_content.formatted.map(|x| x.body), + ), + ); + } + MessageType::Notice(message_content) => { + self.message_map.insert_event( + message.event_id, + room_uuid, + self.notice_message_event_type, + crate::indradb_utils::EventProperties::TextMessage( + message_content.body, + message_content + .formatted + .clone() + .map(|x| x.format.to_string()), + message_content.formatted.map(|x| x.body), + ), + ); + } + _ => {} + } + } + } + Ok(AnySyncTimelineEvent::MessageLike(_)) => {} + Ok(AnySyncTimelineEvent::State(_)) => {} + Err(e) => { + error!("Error deserializing event: {}", e) + } + } + } + } + + // Push to indexer after we preprocessed it + for UUIDRoomMapType { + room_id, + uuid, + room_properties, + } in &self.message_map.room_list + { + inserter + .push(utils::indradb::BulkInsertItem::Vertex( + utils::indradb::Vertex::with_id(*uuid, self.room_type), + )) + .await; + inserter + .push(utils::indradb::BulkInsertItem::VertexProperty( + *uuid, + self.room_id_type, + serde_json::Value::String(room_id.to_string()).into(), + )) + .await; + if let Some(room_name) = &room_properties.name { + inserter + .push(utils::indradb::BulkInsertItem::VertexProperty( + *uuid, + self.room_name_type, + serde_json::Value::String(room_name.to_string()).into(), + )) + .await; + } + if let Some(room_topic) = &room_properties.topic { + inserter + .push(utils::indradb::BulkInsertItem::VertexProperty( + *uuid, + self.room_topic_type, + serde_json::Value::String(room_topic.to_string()).into(), + )) + .await; + } + } + for UUIDEventMapType { + event_id, + uuid, + event_type, + event_properties, + } in &self.message_map.message_list + { + inserter + .push(utils::indradb::BulkInsertItem::Vertex( + utils::indradb::Vertex::with_id(*uuid, *event_type), + )) + .await; + inserter + .push(utils::indradb::BulkInsertItem::VertexProperty( + *uuid, + self.event_id_type, + serde_json::Value::String(event_id.to_string()).into(), + )) + .await; + for event_property in event_properties + .as_vec(*uuid) + .expect("Unable to convert to indradb properties") + { + inserter.push(event_property).await; + } + } + inserter.sync().await.expect("Unable to sync indradb"); + } + } +} diff --git a/crates/utils/Cargo.toml b/crates/utils/Cargo.toml @@ -0,0 +1,11 @@ +[package] +name = "utils" +version = "0.0.0" +edition = "2021" + +# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html + +[dependencies] +indradb-lib = { version = "4.0.0", default_features = false } +indradb-proto = "4.0.0" +tokio = { version = "1.26.0", features = ["time"] } +\ No newline at end of file diff --git a/crates/utils/src/lib.rs b/crates/utils/src/lib.rs @@ -0,0 +1,35 @@ +#[cfg(rocksdb)] +use std::path::Path; + +pub use indradb; +pub use indradb_proto; +use tokio::time::{sleep, Duration}; + +pub async fn get_client() -> Result<indradb_proto::Client, indradb_proto::ClientError> { + let mut client = + indradb_proto::Client::new("grpc://127.0.0.1:27615".try_into().unwrap()).await?; + client.ping().await?; + Ok(client) +} + +pub async fn get_client_retrying() -> Result<indradb_proto::Client, indradb_proto::ClientError> { + let mut retry_count = 10u8; + let mut last_err = Option::<indradb_proto::ClientError>::None; + + while retry_count > 0 { + match get_client().await { + Ok(client) => return Ok(client), + Err(err) => { + last_err = Some(err); + if retry_count == 0 { + break; + } else { + sleep(Duration::from_secs(1)).await; + retry_count -= 1; + } + } + } + } + + Err(last_err.unwrap()) +}